Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC31.91■■■□□ 2.7
CFTRP13569 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC31.91■■■□□ 2.7
CFTRP13569 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 YBX2P1-201ENST00000394192 760 ntBASIC31.91■■■□□ 2.7
CFTRP13569 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
CFTRP13569 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC31.91■■■□□ 2.7
CFTRP13569 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CFTRP13569 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC31.91■■■□□ 2.7
CFTRP13569 SART3-203ENST00000546611 1184 ntBASIC31.91■■■□□ 2.7
CFTRP13569 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC31.91■■■□□ 2.7
CFTRP13569 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFTRP13569 LINC01521-201ENST00000504184 1943 ntBASIC31.9■■■□□ 2.7
CFTRP13569 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFTRP13569 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC31.9■■■□□ 2.7
CFTRP13569 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFTRP13569 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFTRP13569 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
CFTRP13569 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC31.9■■■□□ 2.7
CFTRP13569 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CFTRP13569 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC31.9■■■□□ 2.7
CFTRP13569 LINC02084-201ENST00000606069 1096 ntBASIC31.9■■■□□ 2.7
CFTRP13569 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFTRP13569 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFTRP13569 FIS1-203ENST00000442303 631 ntTSL 3 BASIC31.89■■■□□ 2.7
CFTRP13569 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC31.89■■■□□ 2.7
CFTRP13569 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
CFTRP13569 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC31.89■■■□□ 2.7
CFTRP13569 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFTRP13569 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC31.89■■■□□ 2.7
CFTRP13569 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CFTRP13569 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC31.89■■■□□ 2.69
CFTRP13569 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
CFTRP13569 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CFTRP13569 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC31.88■■■□□ 2.69
CFTRP13569 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC31.88■■■□□ 2.69
CFTRP13569 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC31.88■■■□□ 2.69
CFTRP13569 AC027796.2-201ENST00000575326 344 ntBASIC31.88■■■□□ 2.69
CFTRP13569 Z83851.2-201ENST00000609564 659 ntBASIC31.88■■■□□ 2.69
CFTRP13569 CAND2-206ENST00000626378 333 ntTSL 5 BASIC31.88■■■□□ 2.69
CFTRP13569 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CFTRP13569 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CFTRP13569 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC31.88■■■□□ 2.69
CFTRP13569 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CFTRP13569 UBQLN4P1-201ENST00000461599 1801 ntBASIC31.87■■■□□ 2.69
CFTRP13569 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
CFTRP13569 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC31.87■■■□□ 2.69
CFTRP13569 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC31.87■■■□□ 2.69
CFTRP13569 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC31.87■■■□□ 2.69
CFTRP13569 RBSN-204ENST00000449050 903 ntTSL 2 BASIC31.87■■■□□ 2.69
CFTRP13569 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC31.87■■■□□ 2.69
CFTRP13569 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC31.87■■■□□ 2.69
CFTRP13569 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC31.87■■■□□ 2.69
CFTRP13569 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC31.87■■■□□ 2.69
CFTRP13569 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC31.87■■■□□ 2.69
CFTRP13569 AC025062.2-201ENST00000605477 670 ntBASIC31.87■■■□□ 2.69
CFTRP13569 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC31.87■■■□□ 2.69
CFTRP13569 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 AC007375.3-201ENST00000600936 2314 ntBASIC31.87■■■□□ 2.69
CFTRP13569 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 IRX1P1-201ENST00000438849 1838 ntBASIC31.87■■■□□ 2.69
CFTRP13569 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFTRP13569 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CFTRP13569 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CFTRP13569 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFTRP13569 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC31.86■■■□□ 2.69
CFTRP13569 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC31.86■■■□□ 2.69
CFTRP13569 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
CFTRP13569 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC31.86■■■□□ 2.69
CFTRP13569 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC31.86■■■□□ 2.69
CFTRP13569 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC31.86■■■□□ 2.69
CFTRP13569 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC31.86■■■□□ 2.69
CFTRP13569 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFTRP13569 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CFTRP13569 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CFTRP13569 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
CFTRP13569 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.85■■■□□ 2.69
CFTRP13569 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CFTRP13569 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC31.85■■■□□ 2.69
CFTRP13569 AC011467.2-201ENST00000598425 242 ntBASIC31.85■■■□□ 2.69
CFTRP13569 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC31.85■■■□□ 2.69
CFTRP13569 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC31.85■■■□□ 2.69
CFTRP13569 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CFTRP13569 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CFTRP13569 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
CFTRP13569 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
CFTRP13569 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC31.85■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms