Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 AL512625.2-201ENST00000417533 625 ntBASIC15.23■□□□□ 0.03
SSSCA1O60232 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.23■□□□□ 0.03
SSSCA1O60232 AL121906.2-201ENST00000621597 723 ntBASIC15.23■□□□□ 0.03
SSSCA1O60232 AC006557.6-201ENST00000623071 864 ntBASIC15.23■□□□□ 0.03
SSSCA1O60232 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.23■□□□□ 0.03
SSSCA1O60232 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SSSCA1O60232 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.22■□□□□ 0.03
SSSCA1O60232 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.22■□□□□ 0.03
SSSCA1O60232 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SSSCA1O60232 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.22■□□□□ 0.03
SSSCA1O60232 TSPY21P-201ENST00000433481 731 ntBASIC15.22■□□□□ 0.03
SSSCA1O60232 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.22■□□□□ 0.03
SSSCA1O60232 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.22■□□□□ 0.03
SSSCA1O60232 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 RAP2CP1-201ENST00000605103 478 ntBASIC15.22■□□□□ 0.03
SSSCA1O60232 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSSCA1O60232 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.22■□□□□ 0.03
SSSCA1O60232 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
SSSCA1O60232 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSSCA1O60232 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 OR6D1P-203ENST00000641209 4860 ntBASIC15.21■□□□□ 0.03
SSSCA1O60232 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 ZNRF2P3-201ENST00000424200 374 ntBASIC15.21■□□□□ 0.03
SSSCA1O60232 TUBB8P6-201ENST00000436895 1288 ntBASIC15.21■□□□□ 0.03
SSSCA1O60232 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.21■□□□□ 0.03
SSSCA1O60232 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.21■□□□□ 0.03
SSSCA1O60232 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.21■□□□□ 0.03
SSSCA1O60232 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSSCA1O60232 HEIH-201ENST00000623091 1652 ntBASIC15.21■□□□□ 0.03
SSSCA1O60232 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.21■□□□□ 0.02
SSSCA1O60232 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSSCA1O60232 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSSCA1O60232 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.2■□□□□ 0.02
SSSCA1O60232 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.2■□□□□ 0.02
SSSCA1O60232 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSSCA1O60232 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSSCA1O60232 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms