Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.18■□□□□ 0.5
PEX1O43933 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.18■□□□□ 0.5
PEX1O43933 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.18■□□□□ 0.5
PEX1O43933 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.18■□□□□ 0.5
PEX1O43933 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 AP001412.1-201ENST00000608405 714 ntBASIC18.18■□□□□ 0.5
PEX1O43933 NBPF21P-201ENST00000425093 1451 ntBASIC18.18■□□□□ 0.5
PEX1O43933 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PEX1O43933 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.18■□□□□ 0.5
PEX1O43933 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PEX1O43933 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.18■□□□□ 0.5
PEX1O43933 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.18■□□□□ 0.5
PEX1O43933 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PEX1O43933 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PEX1O43933 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.18■□□□□ 0.5
PEX1O43933 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PEX1O43933 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PEX1O43933 ESPNP-201ENST00000270691 2015 ntBASIC18.17■□□□□ 0.5
PEX1O43933 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.17■□□□□ 0.5
PEX1O43933 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 RARRES2P10-201ENST00000564312 460 ntBASIC18.17■□□□□ 0.5
PEX1O43933 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.17■□□□□ 0.5
PEX1O43933 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PEX1O43933 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PEX1O43933 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.17■□□□□ 0.5
PEX1O43933 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PEX1O43933 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PEX1O43933 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PEX1O43933 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.16■□□□□ 0.5
PEX1O43933 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.16■□□□□ 0.5
PEX1O43933 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.16■□□□□ 0.5
PEX1O43933 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.16■□□□□ 0.5
PEX1O43933 AL049637.2-201ENST00000641778 930 ntBASIC18.16■□□□□ 0.5
PEX1O43933 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.16■□□□□ 0.5
PEX1O43933 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PEX1O43933 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PEX1O43933 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PEX1O43933 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.15■□□□□ 0.5
PEX1O43933 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PEX1O43933 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PEX1O43933 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms