Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ITM2AO43736 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
ITM2AO43736 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ITM2AO43736 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ITM2AO43736 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ITM2AO43736 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.31■□□□□ 0.52
ITM2AO43736 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.31■□□□□ 0.52
ITM2AO43736 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.31■□□□□ 0.52
ITM2AO43736 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.31■□□□□ 0.52
ITM2AO43736 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.31■□□□□ 0.52
ITM2AO43736 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ITM2AO43736 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ITM2AO43736 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
ITM2AO43736 AC138028.4-201ENST00000564984 1845 ntBASIC18.3■□□□□ 0.52
ITM2AO43736 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.3■□□□□ 0.52
ITM2AO43736 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ITM2AO43736 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 REXO1L9P-201ENST00000604264 2108 ntBASIC18.3■□□□□ 0.52
ITM2AO43736 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 KRT8P45-201ENST00000414328 1447 ntBASIC18.3■□□□□ 0.52
ITM2AO43736 AC112777.1-201ENST00000540175 1423 ntBASIC18.3■□□□□ 0.52
ITM2AO43736 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.3■□□□□ 0.52
ITM2AO43736 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
ITM2AO43736 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ITM2AO43736 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ITM2AO43736 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
ITM2AO43736 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ITM2AO43736 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 GNAS-203ENST00000306120 1878 ntBASIC18.29■□□□□ 0.52
ITM2AO43736 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 AC008556.1-201ENST00000610908 2040 ntBASIC18.29■□□□□ 0.52
ITM2AO43736 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
ITM2AO43736 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ITM2AO43736 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.29■□□□□ 0.52
ITM2AO43736 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.29■□□□□ 0.52
ITM2AO43736 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.29■□□□□ 0.52
ITM2AO43736 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ITM2AO43736 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.29■□□□□ 0.52
ITM2AO43736 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
ITM2AO43736 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
ITM2AO43736 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ITM2AO43736 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
ITM2AO43736 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ITM2AO43736 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ITM2AO43736 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ITM2AO43736 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITM2AO43736 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ITM2AO43736 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITM2AO43736 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms