Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.78□□□□□ -0.36
NDUFA1O15239 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
NDUFA1O15239 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NDUFA1O15239 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NDUFA1O15239 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFA1O15239 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
NDUFA1O15239 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.77□□□□□ -0.36
NDUFA1O15239 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NDUFA1O15239 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
NDUFA1O15239 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.77□□□□□ -0.36
NDUFA1O15239 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
NDUFA1O15239 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
NDUFA1O15239 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFA1O15239 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.77□□□□□ -0.37
NDUFA1O15239 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.77□□□□□ -0.37
NDUFA1O15239 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.77□□□□□ -0.37
NDUFA1O15239 AC091874.3-201ENST00000512672 1195 ntBASIC12.77□□□□□ -0.37
NDUFA1O15239 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 MIR4758-201ENST00000577688 71 ntBASIC12.77□□□□□ -0.37
NDUFA1O15239 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 AC092437.1-201ENST00000624794 1048 ntBASIC12.77□□□□□ -0.37
NDUFA1O15239 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NDUFA1O15239 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NDUFA1O15239 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 AC134043.2-201ENST00000624206 2238 ntBASIC12.77□□□□□ -0.37
NDUFA1O15239 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NDUFA1O15239 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.77□□□□□ -0.37
NDUFA1O15239 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NDUFA1O15239 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NDUFA1O15239 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NDUFA1O15239 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NDUFA1O15239 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 AC097658.1-201ENST00000475555 843 ntBASIC12.76□□□□□ -0.37
NDUFA1O15239 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 AC083906.2-201ENST00000511578 360 ntBASIC12.76□□□□□ -0.37
NDUFA1O15239 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.76□□□□□ -0.37
NDUFA1O15239 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.76□□□□□ -0.37
NDUFA1O15239 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.76□□□□□ -0.37
NDUFA1O15239 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NDUFA1O15239 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
NDUFA1O15239 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
NDUFA1O15239 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 AC092368.3-202ENST00000574180 1591 ntBASIC12.76□□□□□ -0.37
NDUFA1O15239 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.76□□□□□ -0.37
NDUFA1O15239 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.76□□□□□ -0.37
NDUFA1O15239 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms