Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC25.91■■□□□ 1.74
CHD2O14647 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CHD2O14647 KRT18P41-201ENST00000518924 1277 ntBASIC25.91■■□□□ 1.74
CHD2O14647 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC25.91■■□□□ 1.74
CHD2O14647 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC25.91■■□□□ 1.74
CHD2O14647 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC25.91■■□□□ 1.74
CHD2O14647 LINC02084-201ENST00000606069 1096 ntBASIC25.91■■□□□ 1.74
CHD2O14647 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CHD2O14647 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC25.91■■□□□ 1.74
CHD2O14647 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHD2O14647 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC25.91■■□□□ 1.74
CHD2O14647 HNRNPA1P28-201ENST00000424481 961 ntBASIC25.91■■□□□ 1.74
CHD2O14647 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC25.91■■□□□ 1.74
CHD2O14647 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC25.91■■□□□ 1.74
CHD2O14647 AC068587.9-201ENST00000641814 219 ntBASIC25.91■■□□□ 1.74
CHD2O14647 CLDN5-201ENST00000403084 2357 ntBASIC25.91■■□□□ 1.74
CHD2O14647 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC25.9■■□□□ 1.74
CHD2O14647 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC25.9■■□□□ 1.74
CHD2O14647 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD2O14647 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC25.9■■□□□ 1.74
CHD2O14647 AC112777.1-201ENST00000540175 1423 ntBASIC25.9■■□□□ 1.74
CHD2O14647 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHD2O14647 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.89■■□□□ 1.74
CHD2O14647 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 MED16-201ENST00000269814 1199 ntTSL 5 BASIC25.89■■□□□ 1.74
CHD2O14647 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CHD2O14647 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 RCN1P2-201ENST00000398357 915 ntBASIC25.89■■□□□ 1.74
CHD2O14647 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC25.89■■□□□ 1.74
CHD2O14647 INTS4P1-201ENST00000438455 1935 ntBASIC25.89■■□□□ 1.74
CHD2O14647 LINC01521-201ENST00000504184 1943 ntBASIC25.89■■□□□ 1.74
CHD2O14647 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CHD2O14647 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHD2O14647 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC25.89■■□□□ 1.73
CHD2O14647 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHD2O14647 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHD2O14647 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CHD2O14647 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 MEG3-211ENST00000452514 461 ntTSL 3 BASIC25.88■■□□□ 1.73
CHD2O14647 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CHD2O14647 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CHD2O14647 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC25.88■■□□□ 1.73
CHD2O14647 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.88■■□□□ 1.73
CHD2O14647 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHD2O14647 AP005117.1-201ENST00000584346 1413 ntBASIC25.88■■□□□ 1.73
CHD2O14647 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC25.88■■□□□ 1.73
CHD2O14647 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC25.88■■□□□ 1.73
CHD2O14647 AC004832.2-201ENST00000426397 482 ntBASIC25.88■■□□□ 1.73
CHD2O14647 RPS2P1-201ENST00000434010 821 ntBASIC25.88■■□□□ 1.73
CHD2O14647 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC25.88■■□□□ 1.73
CHD2O14647 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC25.88■■□□□ 1.73
CHD2O14647 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC25.88■■□□□ 1.73
CHD2O14647 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC25.88■■□□□ 1.73
CHD2O14647 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CHD2O14647 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC25.87■■□□□ 1.73
CHD2O14647 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD2O14647 TP73-AS1-210ENST00000637775 1455 ntBASIC25.87■■□□□ 1.73
CHD2O14647 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC25.87■■□□□ 1.73
CHD2O14647 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC25.87■■□□□ 1.73
CHD2O14647 FIS1-203ENST00000442303 631 ntTSL 3 BASIC25.87■■□□□ 1.73
CHD2O14647 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD2O14647 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD2O14647 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CHD2O14647 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD2O14647 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD2O14647 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms