Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM38O00635 AP003041.3-201ENST00000527151 707 ntBASIC18.76■□□□□ 0.59
TRIM38O00635 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 AL441883.1-201ENST00000566170 1045 ntBASIC18.76■□□□□ 0.59
TRIM38O00635 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM38O00635 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM38O00635 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM38O00635 AP000550.4-202ENST00000639755 178 ntBASIC18.76■□□□□ 0.59
TRIM38O00635 AL031432.5-201ENST00000641059 760 ntBASIC18.76■□□□□ 0.59
TRIM38O00635 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 AIRN-201ENST00000601203 4374 ntBASIC18.76■□□□□ 0.59
TRIM38O00635 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM38O00635 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM38O00635 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM38O00635 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM38O00635 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
TRIM38O00635 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM38O00635 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM38O00635 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM38O00635 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 AL512604.3-201ENST00000569583 964 ntBASIC18.75■□□□□ 0.59
TRIM38O00635 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM38O00635 AC140113.3-201ENST00000605663 199 ntBASIC18.75■□□□□ 0.59
TRIM38O00635 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TRIM38O00635 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM38O00635 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRIM38O00635 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
TRIM38O00635 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TRIM38O00635 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM38O00635 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 AC020763.4-201ENST00000623414 4170 ntBASIC18.74■□□□□ 0.59
TRIM38O00635 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 FAM86EP-206ENST00000510506 987 ntBASIC18.74■□□□□ 0.59
TRIM38O00635 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM38O00635 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM38O00635 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM38O00635 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.74■□□□□ 0.59
TRIM38O00635 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
TRIM38O00635 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM38O00635 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM38O00635 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.74■□□□□ 0.59
TRIM38O00635 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM38O00635 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM38O00635 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM38O00635 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM38O00635 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM38O00635 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM38O00635 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms