Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 PCDHB19P-201ENST00000570871 2371 ntBASIC15.17■□□□□ 0.02
RNF222A6NCQ9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.17■□□□□ 0.02
RNF222A6NCQ9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.17■□□□□ 0.02
RNF222A6NCQ9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF222A6NCQ9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AL356441.2-201ENST00000443009 864 ntBASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF222A6NCQ9 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.16■□□□□ 0.02
RNF222A6NCQ9 AC008556.1-201ENST00000610908 2040 ntBASIC15.16■□□□□ 0.02
RNF222A6NCQ9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 MIR939-201ENST00000401314 82 ntBASIC15.15■□□□□ 0.02
RNF222A6NCQ9 TERF1P5-201ENST00000477545 1207 ntBASIC15.15■□□□□ 0.02
RNF222A6NCQ9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF222A6NCQ9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms