Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
HFM1A2PYH4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC27.53■■■□□ 2
HFM1A2PYH4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC27.53■■■□□ 2
HFM1A2PYH4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC27.53■■■□□ 2
HFM1A2PYH4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
HFM1A2PYH4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
HFM1A2PYH4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC27.53■■■□□ 2
HFM1A2PYH4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
HFM1A2PYH4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
HFM1A2PYH4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC27.53■■■□□ 2
HFM1A2PYH4 AC009102.3-201ENST00000623118 1491 ntBASIC27.53■■■□□ 2
HFM1A2PYH4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC27.52■■■□□ 2
HFM1A2PYH4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC27.52■■■□□ 2
HFM1A2PYH4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC27.52■■■□□ 2
HFM1A2PYH4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC27.52■■■□□ 2
HFM1A2PYH4 AL390719.2-201ENST00000606993 987 ntBASIC27.52■■■□□ 2
HFM1A2PYH4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC27.52■■■□□ 2
HFM1A2PYH4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
HFM1A2PYH4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC27.52■■■□□ 2
HFM1A2PYH4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HFM1A2PYH4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC27.51■■□□□ 1.99
HFM1A2PYH4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC27.51■■□□□ 1.99
HFM1A2PYH4 AL024508.2-201ENST00000607749 1894 ntBASIC27.51■■□□□ 1.99
HFM1A2PYH4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
HFM1A2PYH4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC27.51■■□□□ 1.99
HFM1A2PYH4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC27.51■■□□□ 1.99
HFM1A2PYH4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
HFM1A2PYH4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC27.51■■□□□ 1.99
HFM1A2PYH4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
HFM1A2PYH4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC27.51■■□□□ 1.99
HFM1A2PYH4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
HFM1A2PYH4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
HFM1A2PYH4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HFM1A2PYH4 ATP5G2P1-201ENST00000433580 426 ntBASIC27.5■■□□□ 1.99
HFM1A2PYH4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 AC011498.5-201ENST00000592027 486 ntBASIC27.5■■□□□ 1.99
HFM1A2PYH4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC27.5■■□□□ 1.99
HFM1A2PYH4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
HFM1A2PYH4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HFM1A2PYH4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
HFM1A2PYH4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HFM1A2PYH4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC27.48■■□□□ 1.99
HFM1A2PYH4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HFM1A2PYH4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HFM1A2PYH4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC27.48■■□□□ 1.99
HFM1A2PYH4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC27.48■■□□□ 1.99
HFM1A2PYH4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HFM1A2PYH4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
HFM1A2PYH4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
HFM1A2PYH4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
HFM1A2PYH4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC27.47■■□□□ 1.99
HFM1A2PYH4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
HFM1A2PYH4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
HFM1A2PYH4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
HFM1A2PYH4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
HFM1A2PYH4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
HFM1A2PYH4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
HFM1A2PYH4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms