Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 AL023284.2-201ENST00000405850 579 ntBASIC15.34■□□□□ 0.05
A0A1W2PRF3 AC117947.1-201ENST00000427448 529 ntBASIC15.34■□□□□ 0.05
A0A1W2PRF3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 BX664615.1-201ENST00000443558 458 ntBASIC15.34■□□□□ 0.05
A0A1W2PRF3 AC009947.2-201ENST00000444014 672 ntBASIC15.34■□□□□ 0.05
A0A1W2PRF3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 AC140113.3-201ENST00000605663 199 ntBASIC15.34■□□□□ 0.05
A0A1W2PRF3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
A0A1W2PRF3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
A0A1W2PRF3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
A0A1W2PRF3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
A0A1W2PRF3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
A0A1W2PRF3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.33■□□□□ 0.05
A0A1W2PRF3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.33■□□□□ 0.05
A0A1W2PRF3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 AL138966.2-201ENST00000621997 464 ntBASIC15.33■□□□□ 0.04
A0A1W2PRF3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
A0A1W2PRF3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
A0A1W2PRF3 RCC2P3-201ENST00000418112 1537 ntBASIC15.33■□□□□ 0.04
A0A1W2PRF3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 MCCD1P1-208ENST00000445732 328 ntBASIC15.32■□□□□ 0.04
A0A1W2PRF3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 COX11P1-201ENST00000489116 835 ntBASIC15.32■□□□□ 0.04
A0A1W2PRF3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 KRT18P35-201ENST00000510488 1269 ntBASIC15.32■□□□□ 0.04
A0A1W2PRF3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 WWOX-216ENST00000569818 525 ntBASIC15.32■□□□□ 0.04
A0A1W2PRF3 AL445228.2-201ENST00000605589 952 ntBASIC15.32■□□□□ 0.04
A0A1W2PRF3 CR769767.2-201ENST00000622735 460 ntBASIC15.32■□□□□ 0.04
A0A1W2PRF3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms