Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AL356309.3-201ENST00000624132 1934 ntBASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 SRD5A1P1-201ENST00000442297 786 ntBASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AC133561.4-201ENST00000566112 224 ntBASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 AL596257.1-201ENST00000641463 2694 ntBASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 TSPY13P-201ENST00000338964 914 ntBASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC1Q9Y5R8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 PCDH8P1-201ENST00000428983 2773 ntBASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms