Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC097374.2-201ENST00000618617 1306 ntBASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 SMG8-203ENST00000578922 2178 ntBASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 AC018845.2-201ENST00000568326 409 ntBASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RIMBP3Q9UFD9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 MIR661-201ENST00000384842 89 ntBASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 MIR6752-201ENST00000618442 71 ntBASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC29.61■■■□□ 2.33
RIMBP3Q9UFD9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 STOM-202ENST00000347359 870 ntTSL 2 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 AC073621.1-201ENST00000392730 636 ntBASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 NKAPP1-205ENST00000585790 367 ntBASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 BID-203ENST00000399765 1879 ntTSL 2 BASIC29.6■■■□□ 2.33
RIMBP3Q9UFD9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 GPR89P-201ENST00000407924 1495 ntBASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 AC236430.1-201ENST00000402231 743 ntBASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RIMBP3Q9UFD9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 AC008556.1-201ENST00000610908 2040 ntBASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC29.58■■■□□ 2.33
RIMBP3Q9UFD9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 ANKRD20A8P-203ENST00000641373 517 ntBASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 RCC2P3-201ENST00000418112 1537 ntBASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RIMBP3Q9UFD9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms