Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 AC034236.2-201ENST00000606662 1610 ntBASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 MIR662-201ENST00000384847 95 ntBASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIT1Q9P2V4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 AC006333.2-201ENST00000607957 2099 ntBASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 AL032819.2-201ENST00000624543 2162 ntBASIC18.03■□□□□ 0.48
LRIT1Q9P2V4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 KRT8P26-201ENST00000534154 1276 ntBASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 AC012313.10-201ENST00000623509 926 ntBASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 AC093525.10-201ENST00000625130 1569 ntBASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.02■□□□□ 0.48
LRIT1Q9P2V4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRIT1Q9P2V4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 MIR3652-201ENST00000579335 131 ntBASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRIT1Q9P2V4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms