Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 FGFR3P6-201ENST00000457012 610 ntBASIC19.78■□□□□ 0.76
CHD7Q9P2D1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 AL355877.3-201ENST00000622820 899 ntBASIC19.78■□□□□ 0.76
CHD7Q9P2D1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 MIR5100-201ENST00000579544 119 ntBASIC19.77■□□□□ 0.76
CHD7Q9P2D1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.77■□□□□ 0.76
CHD7Q9P2D1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.77■□□□□ 0.75
CHD7Q9P2D1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 AC132008.2-207ENST00000454517 770 ntBASIC19.76■□□□□ 0.75
CHD7Q9P2D1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 KRT8P7-201ENST00000533003 1432 ntBASIC19.76■□□□□ 0.75
CHD7Q9P2D1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 AP003733.1-201ENST00000491725 852 ntBASIC19.76■□□□□ 0.75
CHD7Q9P2D1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD7Q9P2D1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 MED15P5-201ENST00000423150 992 ntBASIC19.75■□□□□ 0.75
CHD7Q9P2D1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 AC005336.2-201ENST00000593183 939 ntBASIC19.75■□□□□ 0.75
CHD7Q9P2D1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 AC104109.2-201ENST00000602919 1418 ntBASIC19.75■□□□□ 0.75
CHD7Q9P2D1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 AL591684.3-201ENST00000605187 298 ntBASIC19.75■□□□□ 0.75
CHD7Q9P2D1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHD7Q9P2D1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 AL591424.1-201ENST00000442569 1213 ntBASIC19.74■□□□□ 0.75
CHD7Q9P2D1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 LINC01521-201ENST00000504184 1943 ntBASIC19.74■□□□□ 0.75
CHD7Q9P2D1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms