Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 AC091390.4-202ENST00000476426 537 ntBASIC17.42■□□□□ 0.38
RLIMQ9NVW2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 AP000997.3-201ENST00000623333 2250 ntBASIC17.42■□□□□ 0.38
RLIMQ9NVW2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 PRORSD1P-201ENST00000295112 541 ntBASIC17.41■□□□□ 0.38
RLIMQ9NVW2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 RARRES2P10-201ENST00000564312 460 ntBASIC17.41■□□□□ 0.38
RLIMQ9NVW2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RLIMQ9NVW2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 AC008040.2-201ENST00000461049 708 ntBASIC17.4■□□□□ 0.38
RLIMQ9NVW2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RLIMQ9NVW2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.4■□□□□ 0.38
RLIMQ9NVW2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RLIMQ9NVW2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RLIMQ9NVW2 AC004951.3-201ENST00000418645 1148 ntBASIC17.39■□□□□ 0.37
RLIMQ9NVW2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms