Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDLIM7Q9NR12 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDLIM7Q9NR12 KRT8P32-201ENST00000512863 1461 ntBASIC20.89■□□□□ 0.94
PDLIM7Q9NR12 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDLIM7Q9NR12 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 TOB2P1-201ENST00000469761 992 ntBASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDLIM7Q9NR12 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 MIR662-201ENST00000384847 95 ntBASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 SEC1P-202ENST00000473944 940 ntBASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 AC139530.3-201ENST00000620344 690 ntBASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PDLIM7Q9NR12 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 AL136038.4-201ENST00000603606 1261 ntBASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 AL049812.1-201ENST00000432563 2267 ntBASIC20.87■□□□□ 0.93
PDLIM7Q9NR12 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 RNF126P1-202ENST00000569893 925 ntBASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 AL121912.1-201ENST00000603683 238 ntBASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 AC120114.3-201ENST00000611923 658 ntBASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 AL157888.1-201ENST00000631930 593 ntBASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.86■□□□□ 0.93
PDLIM7Q9NR12 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms