Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 WWOX-216ENST00000569818 525 ntBASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC113Q9H0I3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 DUX4L26-201ENST00000489078 1255 ntBASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 AC139887.4-201ENST00000607877 719 ntBASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 AL161938.1-201ENST00000569833 2180 ntBASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC113Q9H0I3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 KRT8P32-201ENST00000512863 1461 ntBASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC113Q9H0I3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 AC009947.2-201ENST00000444014 672 ntBASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 COX11P1-201ENST00000489116 835 ntBASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 YBX1P2-201ENST00000489612 999 ntBASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 AP000974.1-201ENST00000623909 2387 ntBASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC113Q9H0I3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC113Q9H0I3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC113Q9H0I3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC113Q9H0I3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC113Q9H0I3 RCC2P3-201ENST00000418112 1537 ntBASIC20.64■□□□□ 0.9
CCDC113Q9H0I3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC113Q9H0I3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms