Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC141586.4-201ENST00000624558 1573 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC004812.2-201ENST00000611079 2094 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC012676.1-201ENST00000574705 1949 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC068473.5-201ENST00000616428 2072 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 MYF6-201ENST00000228641 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AF241726.1-201ENST00000317902 699 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 Y_RNA.559-201ENST00000384686 107 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 RPL5P5-201ENST00000392009 893 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC002056.1-201ENST00000395613 760 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC022540.1-201ENST00000448214 965 ntTSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 OR7L1P-201ENST00000456181 380 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 UBDP1-202ENST00000457888 382 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 OR9M1P-201ENST00000459641 921 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC108941.1-201ENST00000502853 530 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC008694.1-201ENST00000522076 428 ntTSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC009133.1-204ENST00000569809 967 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC104958.2-201ENST00000605955 1141 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 ZNF542P-204ENST00000482727 1305 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 AC017007.2-201ENST00000504528 1301 ntBASIC11.6□□□□□ -0.55
KRTAP3-3Q9BYR6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 ASH2LP2-201ENST00000453999 1561 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 SMC4P1-201ENST00000414479 527 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 MTATP6P29-201ENST00000415057 132 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 IPMKP1-201ENST00000425988 855 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC006357.1-201ENST00000427073 531 ntTSL 4 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 HOTAIRM1-202ENST00000428939 889 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AL139415.2-201ENST00000431968 163 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 RHEBP2-201ENST00000450289 600 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AP000805.1-201ENST00000471604 784 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC109492.1-201ENST00000503349 602 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms