Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NOTCH4Q99466 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 REXO1L6P-202ENST00000619970 1078 ntBASIC19.24■□□□□ 0.67
NOTCH4Q99466 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.24■□□□□ 0.67
NOTCH4Q99466 AL121912.1-201ENST00000603683 238 ntBASIC19.24■□□□□ 0.67
NOTCH4Q99466 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH4Q99466 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH4Q99466 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
NOTCH4Q99466 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 RN7SL606P-201ENST00000472779 293 ntBASIC19.22■□□□□ 0.67
NOTCH4Q99466 AF238378.1-201ENST00000526806 358 ntBASIC19.22■□□□□ 0.67
NOTCH4Q99466 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 AP000593.1-201ENST00000393668 712 ntBASIC19.22■□□□□ 0.67
NOTCH4Q99466 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 BNIP3P18-201ENST00000593976 575 ntBASIC19.22■□□□□ 0.67
NOTCH4Q99466 AL121772.3-201ENST00000610840 674 ntBASIC19.22■□□□□ 0.67
NOTCH4Q99466 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH4Q99466 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
NOTCH4Q99466 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.21■□□□□ 0.67
NOTCH4Q99466 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.21■□□□□ 0.67
NOTCH4Q99466 AC091304.2-201ENST00000564639 760 ntBASIC19.21■□□□□ 0.67
NOTCH4Q99466 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 AL353692.3-201ENST00000407031 1396 ntBASIC19.21■□□□□ 0.67
NOTCH4Q99466 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH4Q99466 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
NOTCH4Q99466 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
NOTCH4Q99466 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
NOTCH4Q99466 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 AL032819.2-201ENST00000624543 2162 ntBASIC19.2■□□□□ 0.66
NOTCH4Q99466 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms