Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 TERF1P1-201ENST00000311003 1181 ntBASIC15.52■□□□□ 0.08
GAFA1Q96PS6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 AL137013.1-201ENST00000432946 1228 ntBASIC15.52■□□□□ 0.08
GAFA1Q96PS6 ATP5G1P1-201ENST00000448724 379 ntBASIC15.52■□□□□ 0.08
GAFA1Q96PS6 KRT18P41-201ENST00000518924 1277 ntBASIC15.52■□□□□ 0.08
GAFA1Q96PS6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
GAFA1Q96PS6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC112777.1-201ENST00000540175 1423 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC005521.1-201ENST00000393351 872 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 KRT18P23-201ENST00000435622 1283 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AL138966.2-201ENST00000621997 464 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC141257.4-201ENST00000634557 245 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC136944.6-201ENST00000634818 245 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 MYC-208ENST00000641036 567 ntBASIC15.51■□□□□ 0.07
GAFA1Q96PS6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GAFA1Q96PS6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 HOXB1-202ENST00000577092 1414 ntBASIC15.5■□□□□ 0.07
GAFA1Q96PS6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.5■□□□□ 0.07
GAFA1Q96PS6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms