Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FGD4Q96M96 KRT18P1-202ENST00000452408 1331 ntBASIC21.15■□□□□ 0.98
FGD4Q96M96 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.15■□□□□ 0.98
FGD4Q96M96 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FGD4Q96M96 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.15■□□□□ 0.98
FGD4Q96M96 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FGD4Q96M96 AL845331.1-201ENST00000424978 1190 ntBASIC21.15■□□□□ 0.98
FGD4Q96M96 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.15■□□□□ 0.98
FGD4Q96M96 NUS1P1-201ENST00000446295 882 ntBASIC21.15■□□□□ 0.98
FGD4Q96M96 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.15■□□□□ 0.98
FGD4Q96M96 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.15■□□□□ 0.98
FGD4Q96M96 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FGD4Q96M96 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FGD4Q96M96 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FGD4Q96M96 Z83836.1-201ENST00000624605 1642 ntBASIC21.15■□□□□ 0.98
FGD4Q96M96 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
FGD4Q96M96 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FGD4Q96M96 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.14■□□□□ 0.98
FGD4Q96M96 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.14■□□□□ 0.97
FGD4Q96M96 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
FGD4Q96M96 FDX1P1-201ENST00000449115 551 ntBASIC21.14■□□□□ 0.97
FGD4Q96M96 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.14■□□□□ 0.97
FGD4Q96M96 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.14■□□□□ 0.97
FGD4Q96M96 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.14■□□□□ 0.97
FGD4Q96M96 AL390719.2-201ENST00000606993 987 ntBASIC21.14■□□□□ 0.97
FGD4Q96M96 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 AC068587.9-201ENST00000641814 219 ntBASIC21.14■□□□□ 0.97
FGD4Q96M96 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
FGD4Q96M96 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.14■□□□□ 0.97
FGD4Q96M96 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FGD4Q96M96 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
FGD4Q96M96 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.13■□□□□ 0.97
FGD4Q96M96 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
FGD4Q96M96 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FGD4Q96M96 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FGD4Q96M96 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
FGD4Q96M96 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FGD4Q96M96 PVRIG2P-201ENST00000435460 978 ntBASIC21.13■□□□□ 0.97
FGD4Q96M96 AL732292.2-201ENST00000609649 430 ntBASIC21.13■□□□□ 0.97
FGD4Q96M96 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.13■□□□□ 0.97
FGD4Q96M96 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FGD4Q96M96 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
FGD4Q96M96 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.13■□□□□ 0.97
FGD4Q96M96 FP475955.4-201ENST00000623131 1990 ntBASIC21.13■□□□□ 0.97
FGD4Q96M96 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.13■□□□□ 0.97
FGD4Q96M96 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FGD4Q96M96 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FGD4Q96M96 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FGD4Q96M96 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.12■□□□□ 0.97
FGD4Q96M96 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 TSPY19P-201ENST00000418461 509 ntBASIC21.12■□□□□ 0.97
FGD4Q96M96 TSPY18P-201ENST00000441642 509 ntBASIC21.12■□□□□ 0.97
FGD4Q96M96 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 AC111152.3-201ENST00000569699 673 ntBASIC21.12■□□□□ 0.97
FGD4Q96M96 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.12■□□□□ 0.97
FGD4Q96M96 AC005332.3-201ENST00000589904 676 ntBASIC21.12■□□□□ 0.97
FGD4Q96M96 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.12■□□□□ 0.97
FGD4Q96M96 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.12■□□□□ 0.97
FGD4Q96M96 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.12■□□□□ 0.97
FGD4Q96M96 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.12■□□□□ 0.97
FGD4Q96M96 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FGD4Q96M96 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.11■□□□□ 0.97
FGD4Q96M96 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.11■□□□□ 0.97
FGD4Q96M96 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 AC034236.2-201ENST00000606662 1610 ntBASIC21.11■□□□□ 0.97
FGD4Q96M96 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
FGD4Q96M96 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 IFNL4P1-201ENST00000607083 540 ntBASIC21.11■□□□□ 0.97
FGD4Q96M96 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.11■□□□□ 0.97
FGD4Q96M96 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.11■□□□□ 0.97
FGD4Q96M96 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.11■□□□□ 0.97
FGD4Q96M96 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FGD4Q96M96 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
FGD4Q96M96 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FGD4Q96M96 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.1■□□□□ 0.97
FGD4Q96M96 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms