Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CALR3Q96L12 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CALR3Q96L12 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.77■□□□□ 0.76
CALR3Q96L12 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.77■□□□□ 0.76
CALR3Q96L12 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
CALR3Q96L12 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.77■□□□□ 0.75
CALR3Q96L12 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CALR3Q96L12 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CALR3Q96L12 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.76■□□□□ 0.75
CALR3Q96L12 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CALR3Q96L12 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.76■□□□□ 0.75
CALR3Q96L12 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CALR3Q96L12 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.76■□□□□ 0.75
CALR3Q96L12 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CALR3Q96L12 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.76■□□□□ 0.75
CALR3Q96L12 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.76■□□□□ 0.75
CALR3Q96L12 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CALR3Q96L12 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CALR3Q96L12 AL357033.4-201ENST00000617703 1807 ntBASIC19.76■□□□□ 0.75
CALR3Q96L12 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
CALR3Q96L12 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CALR3Q96L12 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CALR3Q96L12 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CALR3Q96L12 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CALR3Q96L12 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CALR3Q96L12 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 AL355802.2-201ENST00000402069 882 ntBASIC19.75■□□□□ 0.75
CALR3Q96L12 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 AP002982.1-201ENST00000492365 877 ntBASIC19.75■□□□□ 0.75
CALR3Q96L12 RNA5SP413-201ENST00000516373 109 ntBASIC19.75■□□□□ 0.75
CALR3Q96L12 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CALR3Q96L12 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.75■□□□□ 0.75
CALR3Q96L12 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.75■□□□□ 0.75
CALR3Q96L12 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CALR3Q96L12 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CALR3Q96L12 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CALR3Q96L12 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CALR3Q96L12 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.75■□□□□ 0.75
CALR3Q96L12 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.74■□□□□ 0.75
CALR3Q96L12 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.74■□□□□ 0.75
CALR3Q96L12 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CALR3Q96L12 AC091390.4-202ENST00000476426 537 ntBASIC19.74■□□□□ 0.75
CALR3Q96L12 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.74■□□□□ 0.75
CALR3Q96L12 RN7SL471P-201ENST00000580476 299 ntBASIC19.74■□□□□ 0.75
CALR3Q96L12 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CALR3Q96L12 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.74■□□□□ 0.75
CALR3Q96L12 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.74■□□□□ 0.75
CALR3Q96L12 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.74■□□□□ 0.75
CALR3Q96L12 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.74■□□□□ 0.75
CALR3Q96L12 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CALR3Q96L12 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CALR3Q96L12 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CALR3Q96L12 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALR3Q96L12 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.73■□□□□ 0.75
CALR3Q96L12 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.73■□□□□ 0.75
CALR3Q96L12 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CALR3Q96L12 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.73■□□□□ 0.75
CALR3Q96L12 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.73■□□□□ 0.75
CALR3Q96L12 AC090192.1-201ENST00000517740 490 ntBASIC19.73■□□□□ 0.75
CALR3Q96L12 CKBP1-201ENST00000565489 1086 ntBASIC19.73■□□□□ 0.75
CALR3Q96L12 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms