Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.99■■□□□ 1.27
RPGRQ92834 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.99■■□□□ 1.27
RPGRQ92834 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.99■■□□□ 1.27
RPGRQ92834 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.99■■□□□ 1.27
RPGRQ92834 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RPGRQ92834 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.99■■□□□ 1.27
RPGRQ92834 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
RPGRQ92834 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
RPGRQ92834 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.99■■□□□ 1.27
RPGRQ92834 RN7SL606P-201ENST00000472779 293 ntBASIC22.99■■□□□ 1.27
RPGRQ92834 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.99■■□□□ 1.27
RPGRQ92834 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.99■■□□□ 1.27
RPGRQ92834 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.99■■□□□ 1.27
RPGRQ92834 AC009065.1-201ENST00000564055 1225 ntBASIC22.99■■□□□ 1.27
RPGRQ92834 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPGRQ92834 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.99■■□□□ 1.27
RPGRQ92834 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.98■■□□□ 1.27
RPGRQ92834 NSUN5P1-202ENST00000421140 1535 ntBASIC22.98■■□□□ 1.27
RPGRQ92834 NSUN5P2-203ENST00000457352 1529 ntBASIC22.98■■□□□ 1.27
RPGRQ92834 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 NUS1P2-201ENST00000417358 873 ntBASIC22.98■■□□□ 1.27
RPGRQ92834 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.98■■□□□ 1.27
RPGRQ92834 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.98■■□□□ 1.27
RPGRQ92834 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.98■■□□□ 1.27
RPGRQ92834 GPALPP1-207ENST00000611650 899 ntBASIC22.98■■□□□ 1.27
RPGRQ92834 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.98■■□□□ 1.27
RPGRQ92834 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.98■■□□□ 1.27
RPGRQ92834 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPGRQ92834 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RPGRQ92834 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
RPGRQ92834 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 AKR1C7P-201ENST00000305623 895 ntBASIC22.97■■□□□ 1.27
RPGRQ92834 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.97■■□□□ 1.27
RPGRQ92834 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.97■■□□□ 1.27
RPGRQ92834 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.97■■□□□ 1.27
RPGRQ92834 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.97■■□□□ 1.27
RPGRQ92834 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.97■■□□□ 1.27
RPGRQ92834 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC22.97■■□□□ 1.27
RPGRQ92834 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
RPGRQ92834 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 AL353692.3-201ENST00000407031 1396 ntBASIC22.97■■□□□ 1.27
RPGRQ92834 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPGRQ92834 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.96■■□□□ 1.27
RPGRQ92834 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.96■■□□□ 1.27
RPGRQ92834 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.96■■□□□ 1.27
RPGRQ92834 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.96■■□□□ 1.27
RPGRQ92834 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.96■■□□□ 1.27
RPGRQ92834 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 SAPCD2P3-201ENST00000455031 850 ntBASIC22.96■■□□□ 1.27
RPGRQ92834 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.96■■□□□ 1.27
RPGRQ92834 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.96■■□□□ 1.27
RPGRQ92834 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.96■■□□□ 1.27
RPGRQ92834 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.96■■□□□ 1.27
RPGRQ92834 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
RPGRQ92834 AC004263.2-201ENST00000617183 678 ntBASIC22.96■■□□□ 1.27
RPGRQ92834 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.96■■□□□ 1.27
RPGRQ92834 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.96■■□□□ 1.27
RPGRQ92834 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.96■■□□□ 1.27
RPGRQ92834 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 FP475955.4-201ENST00000623131 1990 ntBASIC22.96■■□□□ 1.27
RPGRQ92834 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPGRQ92834 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPGRQ92834 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms