Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SMIM11BQ8TCY0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 EDA-201ENST00000338901 1233 ntBASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 PBX2P1-201ENST00000493219 1291 ntBASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 AC016405.3-201ENST00000607710 860 ntBASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM11BQ8TCY0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM11BQ8TCY0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM11BQ8TCY0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM11BQ8TCY0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM11BQ8TCY0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.15□□□□□ -0.47
SMIM11BQ8TCY0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 KRT18P68-201ENST00000392293 1000 ntBASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 MIR939-201ENST00000401314 82 ntBASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 AF213884.3-201ENST00000563833 479 ntBASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 AC100791.3-201ENST00000617619 330 ntBASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM11BQ8TCY0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms