Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC138894.3-201ENST00000603787 634 ntBASIC14.52□□□□□ -0.09
LINC01006Q8NI28 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AC141586.3-201ENST00000562166 1838 ntBASIC14.51□□□□□ -0.09
LINC01006Q8NI28 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AP000347.1-202ENST00000435868 847 ntBASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AC099336.1-202ENST00000602961 463 ntBASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AC124864.1-201ENST00000623408 392 ntBASIC14.51□□□□□ -0.09
LINC01006Q8NI28 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AC068587.9-201ENST00000641814 219 ntBASIC14.51□□□□□ -0.09
LINC01006Q8NI28 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01006Q8NI28 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 AL592071.1-201ENST00000611956 408 ntBASIC14.5□□□□□ -0.09
LINC01006Q8NI28 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms