Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 IER3-202ENST00000376377 1350 ntBASIC19.62■□□□□ 0.73
TTC16Q8NEE8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC16Q8NEE8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.61■□□□□ 0.73
TTC16Q8NEE8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 VENTXP5-201ENST00000523979 775 ntBASIC19.61■□□□□ 0.73
TTC16Q8NEE8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 AP000550.4-202ENST00000639755 178 ntBASIC19.61■□□□□ 0.73
TTC16Q8NEE8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC16Q8NEE8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC16Q8NEE8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 FAM86EP-206ENST00000510506 987 ntBASIC19.59■□□□□ 0.73
TTC16Q8NEE8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 LINC01311-201ENST00000565162 1445 ntBASIC19.59■□□□□ 0.73
TTC16Q8NEE8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TTC16Q8NEE8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC16Q8NEE8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC16Q8NEE8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC16Q8NEE8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC16Q8NEE8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC16Q8NEE8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC16Q8NEE8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms