Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DHX40Q8IX18 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DHX40Q8IX18 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DHX40Q8IX18 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DHX40Q8IX18 AC008556.1-201ENST00000610908 2040 ntBASIC20.78■□□□□ 0.92
DHX40Q8IX18 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 AC138028.4-201ENST00000564984 1845 ntBASIC20.78■□□□□ 0.92
DHX40Q8IX18 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DHX40Q8IX18 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DHX40Q8IX18 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DHX40Q8IX18 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DHX40Q8IX18 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DHX40Q8IX18 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 GNAS-203ENST00000306120 1878 ntBASIC20.77■□□□□ 0.92
DHX40Q8IX18 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.77■□□□□ 0.92
DHX40Q8IX18 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DHX40Q8IX18 AC112777.1-201ENST00000540175 1423 ntBASIC20.77■□□□□ 0.91
DHX40Q8IX18 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.77■□□□□ 0.91
DHX40Q8IX18 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DHX40Q8IX18 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 AC139713.2-201ENST00000641328 2723 ntBASIC20.76■□□□□ 0.91
DHX40Q8IX18 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 UNC93B5-201ENST00000530315 699 ntBASIC20.76■□□□□ 0.91
DHX40Q8IX18 PRKY-204ENST00000533551 1019 ntBASIC20.76■□□□□ 0.91
DHX40Q8IX18 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 KRT8P3-201ENST00000519669 1449 ntBASIC20.76■□□□□ 0.91
DHX40Q8IX18 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DHX40Q8IX18 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DHX40Q8IX18 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DHX40Q8IX18 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
DHX40Q8IX18 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DHX40Q8IX18 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.75■□□□□ 0.91
DHX40Q8IX18 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DHX40Q8IX18 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.75■□□□□ 0.91
DHX40Q8IX18 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DHX40Q8IX18 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 REXO1L9P-201ENST00000604264 2108 ntBASIC20.74■□□□□ 0.91
DHX40Q8IX18 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 PRORSD1P-201ENST00000295112 541 ntBASIC20.74■□□□□ 0.91
DHX40Q8IX18 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 AC006058.3-201ENST00000606217 1069 ntBASIC20.74■□□□□ 0.91
DHX40Q8IX18 MYC-208ENST00000641036 567 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms