Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 NTF6B-201ENST00000591913 560 ntBASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM4Q86VH4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM4Q86VH4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 AL359075.1-203ENST00000462729 1002 ntBASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 SEC1P-202ENST00000473944 940 ntBASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 AC034232.1-201ENST00000506026 1064 ntBASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 KRT18P35-201ENST00000510488 1269 ntBASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM4Q86VH4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 AL445228.2-201ENST00000605589 952 ntBASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms