Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 AC125437.2-201ENST00000625180 2167 ntBASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 AC012615.1-201ENST00000565797 1299 ntBASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 AC141586.3-201ENST00000562166 1838 ntBASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC149Q6ZUS6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 AC138932.1-201ENST00000534164 6830 ntBASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 AL022342.1-201ENST00000400363 863 ntBASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 TOB2P1-201ENST00000469761 992 ntBASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 AL160237.2-201ENST00000556165 472 ntBASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC149Q6ZUS6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC149Q6ZUS6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 FOSL1P1-201ENST00000511041 816 ntBASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 AC009065.1-201ENST00000564055 1225 ntBASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 GPALPP1-207ENST00000611650 899 ntBASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms