Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC005521.1-201ENST00000393351 872 ntBASIC17.51■□□□□ 0.39
RTL4Q6ZR62 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 LIN28AP1-201ENST00000429574 405 ntBASIC17.51■□□□□ 0.39
RTL4Q6ZR62 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 AC010653.2-201ENST00000623505 997 ntBASIC17.51■□□□□ 0.39
RTL4Q6ZR62 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 AL161938.1-201ENST00000569833 2180 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TERF1P1-201ENST00000311003 1181 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 HMGA1P5-201ENST00000412453 271 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TMPOP1-202ENST00000424642 1267 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TSPY23P-201ENST00000440136 739 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 FAM87A-204ENST00000613235 858 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 AL023803.3-201ENST00000615559 522 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TEX21P-204ENST00000641479 1693 ntBASIC17.5■□□□□ 0.39
RTL4Q6ZR62 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL4Q6ZR62 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 AC092338.2-201ENST00000568827 1415 ntBASIC17.49■□□□□ 0.39
RTL4Q6ZR62 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 INGX-201ENST00000359239 846 ntBASIC17.49■□□□□ 0.39
RTL4Q6ZR62 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 AC007663.1-201ENST00000438948 1240 ntBASIC17.49■□□□□ 0.39
RTL4Q6ZR62 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 ATP5G1P1-201ENST00000448724 379 ntBASIC17.49■□□□□ 0.39
RTL4Q6ZR62 AL353719.1-201ENST00000566847 864 ntBASIC17.49■□□□□ 0.39
RTL4Q6ZR62 RN7SL850P-201ENST00000579959 291 ntBASIC17.49■□□□□ 0.39
RTL4Q6ZR62 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL4Q6ZR62 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.48■□□□□ 0.39
RTL4Q6ZR62 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL4Q6ZR62 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL4Q6ZR62 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL4Q6ZR62 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL4Q6ZR62 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL4Q6ZR62 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms