Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 POM121L13P-201ENST00000422362 380 ntBASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 AC023632.3-201ENST00000521633 145 ntBASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 ANO7L1-203ENST00000602586 1720 ntBASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPP4R4Q6NUP7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 PRORSD1P-201ENST00000295112 541 ntBASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 C1QBPP2-201ENST00000528754 825 ntBASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 AC233263.1-201ENST00000578059 224 ntBASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 AC069544.1-201ENST00000609399 999 ntBASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPP4R4Q6NUP7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PPP4R4Q6NUP7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PPP4R4Q6NUP7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PPP4R4Q6NUP7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PPP4R4Q6NUP7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PPP4R4Q6NUP7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 RPS2P52-201ENST00000469610 820 ntBASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 AC120498.8-201ENST00000614275 531 ntBASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PPP4R4Q6NUP7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PPP4R4Q6NUP7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms