Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 KRT89P-201ENST00000620027 1478 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 VENTXP7-201ENST00000475503 772 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 AF238378.1-201ENST00000526806 358 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 AC120114.3-201ENST00000611923 658 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCP2Q5VXM1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 LINC01006-201ENST00000333319 2292 ntBASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCP2Q5VXM1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCP2Q5VXM1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDCP2Q5VXM1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CDCP2Q5VXM1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.71■□□□□ 0.42
CDCP2Q5VXM1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCP2Q5VXM1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AL353692.3-201ENST00000407031 1396 ntBASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AL590627.1-203ENST00000421194 1026 ntBASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AC091607.1-201ENST00000490318 1060 ntBASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 RNA5SP419-201ENST00000515908 135 ntBASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AC064862.7-201ENST00000604520 867 ntBASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDCP2Q5VXM1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP2Q5VXM1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP2Q5VXM1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP2Q5VXM1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP2Q5VXM1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms