Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Z98044.1-201ENST00000632503 1764 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 AC016734.2-201ENST00000624325 1377 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 TSSC2-201ENST00000450217 709 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 AC012183.1-201ENST00000625197 499 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 AL357033.4-201ENST00000617703 1807 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 AL161938.1-201ENST00000569833 2180 ntBASIC19.76■□□□□ 0.75
VARS2Q5ST30 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 MIR3180-4-201ENST00000582223 153 ntBASIC19.75■□□□□ 0.75
VARS2Q5ST30 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VARS2Q5ST30 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.75■□□□□ 0.75
VARS2Q5ST30 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 PVRIG2P-201ENST00000435460 978 ntBASIC19.74■□□□□ 0.75
VARS2Q5ST30 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 KRT8P26-201ENST00000534154 1276 ntBASIC19.74■□□□□ 0.75
VARS2Q5ST30 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 MTMR9LP-203ENST00000426597 1545 ntBASIC19.74■□□□□ 0.75
VARS2Q5ST30 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.74■□□□□ 0.75
VARS2Q5ST30 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VARS2Q5ST30 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.74■□□□□ 0.75
VARS2Q5ST30 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 RNF126P1-202ENST00000569893 925 ntBASIC19.73■□□□□ 0.75
VARS2Q5ST30 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 AL049812.1-201ENST00000432563 2267 ntBASIC19.73■□□□□ 0.75
VARS2Q5ST30 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 AC005332.7-201ENST00000614046 2005 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms