Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LONRF3Q496Y0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LONRF3Q496Y0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.26■□□□□ 0.99
LONRF3Q496Y0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LONRF3Q496Y0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 AC091390.4-202ENST00000476426 537 ntBASIC21.25■□□□□ 0.99
LONRF3Q496Y0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 FITM1-202ENST00000559294 800 ntBASIC21.25■□□□□ 0.99
LONRF3Q496Y0 NAPSB-206ENST00000562112 1266 ntBASIC21.25■□□□□ 0.99
LONRF3Q496Y0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
LONRF3Q496Y0 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.24■□□□□ 0.99
LONRF3Q496Y0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.24■□□□□ 0.99
LONRF3Q496Y0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.24■□□□□ 0.99
LONRF3Q496Y0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 AC145285.6-201ENST00000604632 637 ntBASIC21.24■□□□□ 0.99
LONRF3Q496Y0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 AL499627.1-201ENST00000569373 2188 ntBASIC21.24■□□□□ 0.99
LONRF3Q496Y0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 MTMR9LP-203ENST00000426597 1545 ntBASIC21.24■□□□□ 0.99
LONRF3Q496Y0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LONRF3Q496Y0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 AC005521.1-201ENST00000393351 872 ntBASIC21.23■□□□□ 0.99
LONRF3Q496Y0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 KRT18P57-201ENST00000443599 1254 ntBASIC21.23■□□□□ 0.99
LONRF3Q496Y0 AC008040.2-201ENST00000461049 708 ntBASIC21.23■□□□□ 0.99
LONRF3Q496Y0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 AC068587.9-201ENST00000641814 219 ntBASIC21.23■□□□□ 0.99
LONRF3Q496Y0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LONRF3Q496Y0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.22■□□□□ 0.99
LONRF3Q496Y0 FSCN1P1-201ENST00000568912 1481 ntBASIC21.22■□□□□ 0.99
LONRF3Q496Y0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms