Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SRP54P61011 KRT8P32-201ENST00000512863 1461 ntBASIC18.42■□□□□ 0.54
SRP54P61011 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.42■□□□□ 0.54
SRP54P61011 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.42■□□□□ 0.54
SRP54P61011 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.42■□□□□ 0.54
SRP54P61011 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 AC116407.4-201ENST00000623319 1061 ntBASIC18.42■□□□□ 0.54
SRP54P61011 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.42■□□□□ 0.54
SRP54P61011 AC093484.2-201ENST00000580996 2166 ntBASIC18.42■□□□□ 0.54
SRP54P61011 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SRP54P61011 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SRP54P61011 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP54P61011 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.41■□□□□ 0.54
SRP54P61011 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.41■□□□□ 0.54
SRP54P61011 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.41■□□□□ 0.54
SRP54P61011 SEC1P-202ENST00000473944 940 ntBASIC18.41■□□□□ 0.54
SRP54P61011 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.41■□□□□ 0.54
SRP54P61011 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.41■□□□□ 0.54
SRP54P61011 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.41■□□□□ 0.54
SRP54P61011 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
SRP54P61011 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.41■□□□□ 0.54
SRP54P61011 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.41■□□□□ 0.54
SRP54P61011 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP54P61011 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SRP54P61011 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.4■□□□□ 0.54
SRP54P61011 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 HCG11-201ENST00000411553 5696 ntBASIC18.4■□□□□ 0.54
SRP54P61011 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SRP54P61011 HBZP1-201ENST00000354915 429 ntBASIC18.4■□□□□ 0.54
SRP54P61011 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.4■□□□□ 0.54
SRP54P61011 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.4■□□□□ 0.54
SRP54P61011 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.4■□□□□ 0.54
SRP54P61011 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.4■□□□□ 0.54
SRP54P61011 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.4■□□□□ 0.54
SRP54P61011 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.4■□□□□ 0.54
SRP54P61011 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP54P61011 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
SRP54P61011 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.39■□□□□ 0.54
SRP54P61011 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRP54P61011 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRP54P61011 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.39■□□□□ 0.54
SRP54P61011 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.39■□□□□ 0.54
SRP54P61011 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRP54P61011 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRP54P61011 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRP54P61011 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRP54P61011 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.39■□□□□ 0.53
SRP54P61011 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP54P61011 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP54P61011 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.39■□□□□ 0.53
SRP54P61011 AC092597.1-201ENST00000487352 616 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms