Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PER3P56645 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PER3P56645 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
PER3P56645 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PER3P56645 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.28■□□□□ 0.36
PER3P56645 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.28■□□□□ 0.36
PER3P56645 AL359075.1-203ENST00000462729 1002 ntBASIC17.28■□□□□ 0.36
PER3P56645 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PER3P56645 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PER3P56645 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PER3P56645 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PER3P56645 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
PER3P56645 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PER3P56645 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PER3P56645 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.27■□□□□ 0.36
PER3P56645 CA15P1-201ENST00000481698 905 ntBASIC17.27■□□□□ 0.36
PER3P56645 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.27■□□□□ 0.36
PER3P56645 VENTXP5-201ENST00000523979 775 ntBASIC17.27■□□□□ 0.36
PER3P56645 AL353719.1-201ENST00000566847 864 ntBASIC17.27■□□□□ 0.36
PER3P56645 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.27■□□□□ 0.36
PER3P56645 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.27■□□□□ 0.36
PER3P56645 CLEC4GP1-201ENST00000596555 870 ntBASIC17.27■□□□□ 0.36
PER3P56645 AC008622.2-201ENST00000617006 1229 ntBASIC17.27■□□□□ 0.36
PER3P56645 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PER3P56645 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PER3P56645 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.27■□□□□ 0.35
PER3P56645 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PER3P56645 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PER3P56645 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PER3P56645 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PER3P56645 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PER3P56645 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PER3P56645 AL691432.2-201ENST00000607222 2038 ntBASIC17.26■□□□□ 0.35
PER3P56645 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
PER3P56645 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.26■□□□□ 0.35
PER3P56645 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 AC116407.4-201ENST00000623319 1061 ntBASIC17.26■□□□□ 0.35
PER3P56645 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PER3P56645 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 AL032819.2-201ENST00000624543 2162 ntBASIC17.26■□□□□ 0.35
PER3P56645 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PER3P56645 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PER3P56645 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PER3P56645 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PER3P56645 AC005332.1-201ENST00000577698 1310 ntBASIC17.25■□□□□ 0.35
PER3P56645 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PER3P56645 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 AC005332.7-201ENST00000614046 2005 ntBASIC17.25■□□□□ 0.35
PER3P56645 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.25■□□□□ 0.35
PER3P56645 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.25■□□□□ 0.35
PER3P56645 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.25■□□□□ 0.35
PER3P56645 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.25■□□□□ 0.35
PER3P56645 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PER3P56645 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms