Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB3P54753 AC093484.2-201ENST00000580996 2166 ntBASIC19.51■□□□□ 0.71
EPHB3P54753 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB3P54753 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
EPHB3P54753 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.51■□□□□ 0.71
EPHB3P54753 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB3P54753 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.51■□□□□ 0.71
EPHB3P54753 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB3P54753 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.51■□□□□ 0.71
EPHB3P54753 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.51■□□□□ 0.71
EPHB3P54753 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EPHB3P54753 CHCHD2P8-201ENST00000429873 447 ntBASIC19.5■□□□□ 0.71
EPHB3P54753 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHB3P54753 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHB3P54753 AC009065.1-201ENST00000564055 1225 ntBASIC19.5■□□□□ 0.71
EPHB3P54753 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHB3P54753 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB3P54753 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EPHB3P54753 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB3P54753 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
EPHB3P54753 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
EPHB3P54753 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
EPHB3P54753 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
EPHB3P54753 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.49■□□□□ 0.71
EPHB3P54753 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.49■□□□□ 0.71
EPHB3P54753 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.49■□□□□ 0.71
EPHB3P54753 AL121894.2-201ENST00000602977 491 ntBASIC19.49■□□□□ 0.71
EPHB3P54753 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.49■□□□□ 0.71
EPHB3P54753 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB3P54753 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 AP002383.4-201ENST00000442518 975 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 PRELID1P1-202ENST00000567272 903 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
EPHB3P54753 MIR3180-1-201ENST00000580374 94 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.48■□□□□ 0.71
EPHB3P54753 MIR3180-3-201ENST00000584616 94 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 AP002414.4-201ENST00000589764 1148 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 AL691432.3-201ENST00000621860 400 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 AC012313.10-201ENST00000623509 926 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHB3P54753 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB3P54753 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
EPHB3P54753 AC007952.6-201ENST00000573168 2673 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms