Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.56■□□□□ 0.88
ACLYP53396 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ACLYP53396 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.56■□□□□ 0.88
ACLYP53396 SLC25A1P1-201ENST00000528351 927 ntBASIC20.56■□□□□ 0.88
ACLYP53396 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.56■□□□□ 0.88
ACLYP53396 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.56■□□□□ 0.88
ACLYP53396 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.56■□□□□ 0.88
ACLYP53396 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.56■□□□□ 0.88
ACLYP53396 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.56■□□□□ 0.88
ACLYP53396 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACLYP53396 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ACLYP53396 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ACLYP53396 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.55■□□□□ 0.88
ACLYP53396 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 TREX1-205ENST00000625293 1783 ntBASIC20.55■□□□□ 0.88
ACLYP53396 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.55■□□□□ 0.88
ACLYP53396 AC009065.1-201ENST00000564055 1225 ntBASIC20.55■□□□□ 0.88
ACLYP53396 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.55■□□□□ 0.88
ACLYP53396 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.55■□□□□ 0.88
ACLYP53396 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 IRX1P1-201ENST00000438849 1838 ntBASIC20.55■□□□□ 0.88
ACLYP53396 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ACLYP53396 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.55■□□□□ 0.88
ACLYP53396 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ACLYP53396 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.54■□□□□ 0.88
ACLYP53396 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.54■□□□□ 0.88
ACLYP53396 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.54■□□□□ 0.88
ACLYP53396 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.54■□□□□ 0.88
ACLYP53396 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.54■□□□□ 0.88
ACLYP53396 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 AL031284.1-201ENST00000419297 478 ntBASIC20.54■□□□□ 0.88
ACLYP53396 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.54■□□□□ 0.88
ACLYP53396 KRT18P67-201ENST00000432816 1264 ntBASIC20.54■□□□□ 0.88
ACLYP53396 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.54■□□□□ 0.88
ACLYP53396 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.54■□□□□ 0.88
ACLYP53396 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.54■□□□□ 0.88
ACLYP53396 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.54■□□□□ 0.88
ACLYP53396 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.54■□□□□ 0.88
ACLYP53396 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.54■□□□□ 0.88
ACLYP53396 BNIP3P18-201ENST00000593976 575 ntBASIC20.54■□□□□ 0.88
ACLYP53396 AL591684.3-201ENST00000605187 298 ntBASIC20.54■□□□□ 0.88
ACLYP53396 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.54■□□□□ 0.88
ACLYP53396 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACLYP53396 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.53■□□□□ 0.88
ACLYP53396 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.53■□□□□ 0.88
ACLYP53396 MIR5100-201ENST00000579544 119 ntBASIC20.53■□□□□ 0.88
ACLYP53396 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.53■□□□□ 0.88
ACLYP53396 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
ACLYP53396 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACLYP53396 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
ACLYP53396 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms