Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CENPAP49450 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPAP49450 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CENPAP49450 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CENPAP49450 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPAP49450 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CENPAP49450 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.93■□□□□ 0.3
CENPAP49450 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.93■□□□□ 0.3
CENPAP49450 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.93■□□□□ 0.3
CENPAP49450 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.93■□□□□ 0.3
CENPAP49450 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
CENPAP49450 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.93■□□□□ 0.3
CENPAP49450 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.93■□□□□ 0.3
CENPAP49450 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.93■□□□□ 0.3
CENPAP49450 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
CENPAP49450 AC104581.1-202ENST00000635932 2618 ntBASIC16.93■□□□□ 0.3
CENPAP49450 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CENPAP49450 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPAP49450 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
CENPAP49450 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.92■□□□□ 0.3
CENPAP49450 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CENPAP49450 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.92■□□□□ 0.3
CENPAP49450 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.92■□□□□ 0.3
CENPAP49450 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.92■□□□□ 0.3
CENPAP49450 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.92■□□□□ 0.3
CENPAP49450 AC006058.3-201ENST00000606217 1069 ntBASIC16.92■□□□□ 0.3
CENPAP49450 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.92■□□□□ 0.3
CENPAP49450 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CENPAP49450 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPAP49450 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPAP49450 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 AL512353.2-201ENST00000448759 1962 ntBASIC16.91■□□□□ 0.3
CENPAP49450 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPAP49450 KRT16P5-201ENST00000455284 522 ntBASIC16.91■□□□□ 0.3
CENPAP49450 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms