Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDKN2CP42773 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKN2CP42773 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDKN2CP42773 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDKN2CP42773 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
CDKN2CP42773 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDKN2CP42773 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 AL162741.1-201ENST00000565563 1558 ntBASIC17.68■□□□□ 0.42
CDKN2CP42773 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKN2CP42773 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKN2CP42773 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKN2CP42773 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CDKN2CP42773 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKN2CP42773 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKN2CP42773 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKN2CP42773 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CDKN2CP42773 AC135776.1-201ENST00000319817 2481 ntBASIC17.67■□□□□ 0.42
CDKN2CP42773 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKN2CP42773 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CDKN2CP42773 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKN2CP42773 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.67■□□□□ 0.42
CDKN2CP42773 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKN2CP42773 AL353708.3-201ENST00000610272 989 ntBASIC17.67■□□□□ 0.42
CDKN2CP42773 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.67■□□□□ 0.42
CDKN2CP42773 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.67■□□□□ 0.42
CDKN2CP42773 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2CP42773 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKN2CP42773 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.67■□□□□ 0.42
CDKN2CP42773 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CDKN2CP42773 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKN2CP42773 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKN2CP42773 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDKN2CP42773 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDKN2CP42773 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CDKN2CP42773 AC004951.3-201ENST00000418645 1148 ntBASIC17.66■□□□□ 0.42
CDKN2CP42773 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.66■□□□□ 0.42
CDKN2CP42773 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKN2CP42773 KSR1P1-201ENST00000446298 240 ntBASIC17.66■□□□□ 0.42
CDKN2CP42773 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKN2CP42773 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKN2CP42773 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDKN2CP42773 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKN2CP42773 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2CP42773 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKN2CP42773 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDKN2CP42773 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDKN2CP42773 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKN2CP42773 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2CP42773 AC128676.1-201ENST00000454392 318 ntBASIC17.65■□□□□ 0.42
CDKN2CP42773 C1QBPP2-201ENST00000528754 825 ntBASIC17.65■□□□□ 0.42
CDKN2CP42773 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.65■□□□□ 0.42
CDKN2CP42773 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKN2CP42773 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms