Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.67■■□□□ 1.38
COL15A1P39059 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
COL15A1P39059 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 MIR564-202ENST00000385049 94 ntBASIC23.66■■□□□ 1.38
COL15A1P39059 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 AL592071.1-201ENST00000611956 408 ntBASIC23.66■■□□□ 1.38
COL15A1P39059 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.66■■□□□ 1.38
COL15A1P39059 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
COL15A1P39059 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
COL15A1P39059 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.66■■□□□ 1.38
COL15A1P39059 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL15A1P39059 FP475955.4-201ENST00000623131 1990 ntBASIC23.66■■□□□ 1.38
COL15A1P39059 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL15A1P39059 TSPY12P-201ENST00000421279 868 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.65■■□□□ 1.38
COL15A1P39059 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 KRT16P4-201ENST00000453883 522 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.65■■□□□ 1.38
COL15A1P39059 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 LINC01711-201ENST00000598340 967 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 AC099336.1-202ENST00000602961 463 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.65■■□□□ 1.38
COL15A1P39059 KRT8P32-201ENST00000512863 1461 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
COL15A1P39059 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 AKR1C7P-201ENST00000305623 895 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 IGHGP-201ENST00000390555 1178 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.65■■□□□ 1.38
COL15A1P39059 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.65■■□□□ 1.38
COL15A1P39059 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.65■■□□□ 1.38
COL15A1P39059 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.65■■□□□ 1.38
COL15A1P39059 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL15A1P39059 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.65■■□□□ 1.38
COL15A1P39059 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.65■■□□□ 1.38
COL15A1P39059 AC004263.2-201ENST00000617183 678 ntBASIC23.65■■□□□ 1.38
COL15A1P39059 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.65■■□□□ 1.38
COL15A1P39059 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.64■■□□□ 1.38
COL15A1P39059 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL15A1P39059 AL032819.2-201ENST00000624543 2162 ntBASIC23.64■■□□□ 1.37
COL15A1P39059 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL15A1P39059 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.64■■□□□ 1.37
COL15A1P39059 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL15A1P39059 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.64■■□□□ 1.37
COL15A1P39059 AC034236.2-201ENST00000606662 1610 ntBASIC23.64■■□□□ 1.37
COL15A1P39059 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL15A1P39059 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL15A1P39059 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL15A1P39059 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL15A1P39059 MRPL3P1-201ENST00000400109 1033 ntBASIC23.64■■□□□ 1.37
COL15A1P39059 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.64■■□□□ 1.37
COL15A1P39059 Z69720.1-201ENST00000601483 472 ntBASIC23.64■■□□□ 1.37
COL15A1P39059 AL121912.1-201ENST00000603683 238 ntBASIC23.64■■□□□ 1.37
COL15A1P39059 IGHV3-41-201ENST00000613121 348 ntBASIC23.64■■□□□ 1.37
COL15A1P39059 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.64■■□□□ 1.37
COL15A1P39059 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
COL15A1P39059 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.63■■□□□ 1.37
COL15A1P39059 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
COL15A1P39059 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.63■■□□□ 1.37
COL15A1P39059 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL15A1P39059 IGHV3-47-201ENST00000425060 335 ntBASIC23.63■■□□□ 1.37
COL15A1P39059 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.63■■□□□ 1.37
COL15A1P39059 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms