Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.99■■□□□ 1.27
PDE6BP35913 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.99■■□□□ 1.27
PDE6BP35913 AC092865.5-201ENST00000545435 363 ntBASIC22.99■■□□□ 1.27
PDE6BP35913 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 AC148477.8-201ENST00000624298 468 ntBASIC22.99■■□□□ 1.27
PDE6BP35913 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.99■■□□□ 1.27
PDE6BP35913 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.98■■□□□ 1.27
PDE6BP35913 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PDE6BP35913 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PDE6BP35913 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.98■■□□□ 1.27
PDE6BP35913 PKD1P6-201ENST00000343738 4769 ntBASIC22.98■■□□□ 1.27
PDE6BP35913 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.98■■□□□ 1.27
PDE6BP35913 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDE6BP35913 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.98■■□□□ 1.27
PDE6BP35913 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.98■■□□□ 1.27
PDE6BP35913 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PDE6BP35913 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PDE6BP35913 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.97■■□□□ 1.27
PDE6BP35913 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.97■■□□□ 1.27
PDE6BP35913 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.97■■□□□ 1.27
PDE6BP35913 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
PDE6BP35913 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.97■■□□□ 1.27
PDE6BP35913 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.97■■□□□ 1.27
PDE6BP35913 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.97■■□□□ 1.27
PDE6BP35913 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.97■■□□□ 1.27
PDE6BP35913 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDE6BP35913 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.96■■□□□ 1.27
PDE6BP35913 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
PDE6BP35913 MIR1233-2-201ENST00000408138 82 ntBASIC22.96■■□□□ 1.27
PDE6BP35913 MIR1233-1-201ENST00000408722 82 ntBASIC22.96■■□□□ 1.27
PDE6BP35913 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.96■■□□□ 1.27
PDE6BP35913 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.96■■□□□ 1.27
PDE6BP35913 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.96■■□□□ 1.27
PDE6BP35913 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.96■■□□□ 1.27
PDE6BP35913 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.96■■□□□ 1.27
PDE6BP35913 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDE6BP35913 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
PDE6BP35913 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE6BP35913 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE6BP35913 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE6BP35913 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDE6BP35913 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.95■■□□□ 1.26
PDE6BP35913 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.95■■□□□ 1.26
PDE6BP35913 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.95■■□□□ 1.26
PDE6BP35913 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
PDE6BP35913 AC243591.1-201ENST00000452967 1364 ntBASIC22.95■■□□□ 1.26
PDE6BP35913 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.95■■□□□ 1.26
PDE6BP35913 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.95■■□□□ 1.26
PDE6BP35913 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.95■■□□□ 1.26
PDE6BP35913 PMS2P7-201ENST00000506558 1336 ntBASIC22.95■■□□□ 1.26
PDE6BP35913 POLD2P1-201ENST00000511220 997 ntBASIC22.95■■□□□ 1.26
PDE6BP35913 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.95■■□□□ 1.26
PDE6BP35913 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDE6BP35913 AC008608.2-201ENST00000606089 416 ntBASIC22.95■■□□□ 1.26
PDE6BP35913 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PDE6BP35913 AC114341.1-201ENST00000618070 349 ntBASIC22.95■■□□□ 1.26
PDE6BP35913 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
PDE6BP35913 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDE6BP35913 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE6BP35913 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
PDE6BP35913 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.94■■□□□ 1.26
PDE6BP35913 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.94■■□□□ 1.26
PDE6BP35913 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.94■■□□□ 1.26
PDE6BP35913 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.94■■□□□ 1.26
PDE6BP35913 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE6BP35913 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDE6BP35913 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
PDE6BP35913 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms