Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
SHC1P29353 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.13■□□□□ 0.33
SHC1P29353 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC1P29353 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 MMP23A-201ENST00000234610 1017 ntBASIC17.13■□□□□ 0.33
SHC1P29353 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 AC087499.1-201ENST00000418141 1075 ntBASIC17.13■□□□□ 0.33
SHC1P29353 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.13■□□□□ 0.33
SHC1P29353 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC1P29353 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.13■□□□□ 0.33
SHC1P29353 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC1P29353 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
SHC1P29353 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC1P29353 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC1P29353 AC135050.7-201ENST00000624508 2218 ntBASIC17.13■□□□□ 0.33
SHC1P29353 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC1P29353 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC1P29353 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SHC1P29353 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC1P29353 FP475955.4-201ENST00000623131 1990 ntBASIC17.12■□□□□ 0.33
SHC1P29353 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC1P29353 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 FEM1AP3-201ENST00000403722 1741 ntBASIC17.12■□□□□ 0.33
SHC1P29353 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC1P29353 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC1P29353 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SHC1P29353 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHC1P29353 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC1P29353 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC1P29353 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC1P29353 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC1P29353 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC1P29353 AC010947.1-201ENST00000623454 693 ntBASIC17.11■□□□□ 0.33
SHC1P29353 AC073912.3-201ENST00000624414 853 ntBASIC17.11■□□□□ 0.33
SHC1P29353 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC1P29353 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHC1P29353 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHC1P29353 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC1P29353 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms