Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
HTR1BP28222 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 AL031133.1-201ENST00000406807 723 ntBASIC18.6■□□□□ 0.57
HTR1BP28222 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.6■□□□□ 0.57
HTR1BP28222 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.6■□□□□ 0.57
HTR1BP28222 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
HTR1BP28222 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.6■□□□□ 0.57
HTR1BP28222 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 MIR3180-5-201ENST00000583743 153 ntBASIC18.6■□□□□ 0.57
HTR1BP28222 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.6■□□□□ 0.57
HTR1BP28222 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HTR1BP28222 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
HTR1BP28222 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.59■□□□□ 0.57
HTR1BP28222 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HTR1BP28222 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.59■□□□□ 0.57
HTR1BP28222 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
HTR1BP28222 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.59■□□□□ 0.57
HTR1BP28222 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.59■□□□□ 0.57
HTR1BP28222 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.59■□□□□ 0.57
HTR1BP28222 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HTR1BP28222 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.59■□□□□ 0.57
HTR1BP28222 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
HTR1BP28222 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HTR1BP28222 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.59■□□□□ 0.57
HTR1BP28222 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1BP28222 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTR1BP28222 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.58■□□□□ 0.57
HTR1BP28222 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HTR1BP28222 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HTR1BP28222 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.58■□□□□ 0.57
HTR1BP28222 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTR1BP28222 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTR1BP28222 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTR1BP28222 FEM1AP3-201ENST00000403722 1741 ntBASIC18.58■□□□□ 0.57
HTR1BP28222 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HTR1BP28222 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 AL671277.2-201ENST00000458060 996 ntBASIC18.58■□□□□ 0.56
HTR1BP28222 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.58■□□□□ 0.56
HTR1BP28222 GCSHP2-201ENST00000560971 527 ntBASIC18.58■□□□□ 0.56
HTR1BP28222 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.58■□□□□ 0.56
HTR1BP28222 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 AC036111.1-201ENST00000533973 1582 ntBASIC18.58■□□□□ 0.56
HTR1BP28222 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.58■□□□□ 0.56
HTR1BP28222 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.58■□□□□ 0.56
HTR1BP28222 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR1BP28222 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.57■□□□□ 0.56
HTR1BP28222 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR1BP28222 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
HTR1BP28222 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HTR1BP28222 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTR1BP28222 STARP1-201ENST00000397973 869 ntBASIC18.57■□□□□ 0.56
HTR1BP28222 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms