Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 EGLN1P1-201ENST00000531623 762 ntBASIC20.34■□□□□ 0.85
RFX1P22670 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 AC011298.2-201ENST00000617989 482 ntBASIC20.34■□□□□ 0.85
RFX1P22670 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 WIZP1-201ENST00000531444 2299 ntBASIC20.34■□□□□ 0.85
RFX1P22670 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX1P22670 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX1P22670 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX1P22670 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RFX1P22670 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFX1P22670 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFX1P22670 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFX1P22670 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.33■□□□□ 0.85
RFX1P22670 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RFX1P22670 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFX1P22670 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RFX1P22670 CRYGFP-201ENST00000418459 633 ntBASIC20.33■□□□□ 0.85
RFX1P22670 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFX1P22670 KRT18P56-201ENST00000507275 550 ntBASIC20.33■□□□□ 0.85
RFX1P22670 CKBP1-201ENST00000565489 1086 ntBASIC20.33■□□□□ 0.85
RFX1P22670 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.33■□□□□ 0.85
RFX1P22670 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.33■□□□□ 0.85
RFX1P22670 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.33■□□□□ 0.85
RFX1P22670 AC068587.9-201ENST00000641814 219 ntBASIC20.33■□□□□ 0.85
RFX1P22670 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
RFX1P22670 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.33■□□□□ 0.84
RFX1P22670 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX1P22670 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX1P22670 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.33■□□□□ 0.84
RFX1P22670 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX1P22670 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 KRT8P32-201ENST00000512863 1461 ntBASIC20.32■□□□□ 0.84
RFX1P22670 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.32■□□□□ 0.84
RFX1P22670 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
RFX1P22670 AC092647.4-201ENST00000457211 535 ntBASIC20.32■□□□□ 0.84
RFX1P22670 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 AC130371.2-201ENST00000619443 611 ntBASIC20.32■□□□□ 0.84
RFX1P22670 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.32■□□□□ 0.84
RFX1P22670 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX1P22670 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFX1P22670 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.31■□□□□ 0.84
RFX1P22670 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 FAM207BP-201ENST00000447172 505 ntBASIC20.31■□□□□ 0.84
RFX1P22670 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RFX1P22670 B3GAT3P1-201ENST00000471720 806 ntBASIC20.31■□□□□ 0.84
RFX1P22670 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.31■□□□□ 0.84
RFX1P22670 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.31■□□□□ 0.84
RFX1P22670 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.31■□□□□ 0.84
RFX1P22670 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX1P22670 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFX1P22670 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
RFX1P22670 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.3■□□□□ 0.84
RFX1P22670 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms