Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM3P20309 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM3P20309 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRM3P20309 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRM3P20309 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.62■□□□□ 0.57
CHRM3P20309 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHRM3P20309 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRM3P20309 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM3P20309 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM3P20309 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRM3P20309 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CHRM3P20309 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM3P20309 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM3P20309 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRM3P20309 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CHRM3P20309 HEIH-201ENST00000623091 1652 ntBASIC18.61■□□□□ 0.57
CHRM3P20309 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 AC096733.2-201ENST00000609937 1394 ntBASIC18.61■□□□□ 0.57
CHRM3P20309 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRM3P20309 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRM3P20309 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 CRYGFP-201ENST00000418459 633 ntBASIC18.61■□□□□ 0.57
CHRM3P20309 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRM3P20309 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.61■□□□□ 0.57
CHRM3P20309 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CHRM3P20309 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHRM3P20309 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRM3P20309 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRM3P20309 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM3P20309 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRM3P20309 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRM3P20309 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRM3P20309 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CHRM3P20309 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRM3P20309 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 MIR4785-201ENST00000585005 73 ntBASIC18.6■□□□□ 0.57
CHRM3P20309 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHRM3P20309 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRM3P20309 ANO7L1-203ENST00000602586 1720 ntBASIC18.6■□□□□ 0.57
CHRM3P20309 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRM3P20309 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRM3P20309 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRM3P20309 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHRM3P20309 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRM3P20309 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRM3P20309 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRM3P20309 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHRM3P20309 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHRM3P20309 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRM3P20309 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRM3P20309 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRM3P20309 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRM3P20309 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRM3P20309 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRM3P20309 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRM3P20309 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms