Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CD53P19397 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.98■□□□□ 0.31
CD53P19397 SLC25A3P1-201ENST00000443844 931 ntBASIC16.98■□□□□ 0.31
CD53P19397 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.98■□□□□ 0.31
CD53P19397 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.98■□□□□ 0.31
CD53P19397 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD53P19397 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD53P19397 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD53P19397 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD53P19397 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.98■□□□□ 0.31
CD53P19397 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD53P19397 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CD53P19397 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.97■□□□□ 0.31
CD53P19397 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD53P19397 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.97■□□□□ 0.31
CD53P19397 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 NIFKP9-201ENST00000419265 221 ntBASIC16.97■□□□□ 0.31
CD53P19397 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.97■□□□□ 0.31
CD53P19397 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.97■□□□□ 0.31
CD53P19397 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.97■□□□□ 0.31
CD53P19397 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD53P19397 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.97■□□□□ 0.31
CD53P19397 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.97■□□□□ 0.31
CD53P19397 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.97■□□□□ 0.31
CD53P19397 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD53P19397 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.97■□□□□ 0.31
CD53P19397 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.97■□□□□ 0.31
CD53P19397 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CD53P19397 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.96■□□□□ 0.31
CD53P19397 KRT16P1-201ENST00000399124 1418 ntBASIC16.96■□□□□ 0.31
CD53P19397 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.96■□□□□ 0.31
CD53P19397 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.96■□□□□ 0.31
CD53P19397 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.96■□□□□ 0.31
CD53P19397 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.96■□□□□ 0.31
CD53P19397 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.96■□□□□ 0.31
CD53P19397 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.96■□□□□ 0.31
CD53P19397 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.96■□□□□ 0.31
CD53P19397 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.96■□□□□ 0.31
CD53P19397 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD53P19397 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.96■□□□□ 0.3
CD53P19397 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CD53P19397 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CD53P19397 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CD53P19397 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
CD53P19397 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.95■□□□□ 0.3
CD53P19397 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.95■□□□□ 0.3
CD53P19397 AC104417.2-201ENST00000562989 1793 ntBASIC16.95■□□□□ 0.3
CD53P19397 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.95■□□□□ 0.3
CD53P19397 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
CD53P19397 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.95■□□□□ 0.3
CD53P19397 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.95■□□□□ 0.3
CD53P19397 DUX4L26-201ENST00000489078 1255 ntBASIC16.95■□□□□ 0.3
CD53P19397 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD53P19397 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.95■□□□□ 0.3
CD53P19397 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.95■□□□□ 0.3
CD53P19397 NTF6B-201ENST00000591913 560 ntBASIC16.95■□□□□ 0.3
CD53P19397 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms