Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ERCC2P18074 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 AC126763.1-201ENST00000552015 2118 ntBASIC19.2■□□□□ 0.66
ERCC2P18074 WWOX-216ENST00000569818 525 ntBASIC19.2■□□□□ 0.66
ERCC2P18074 AC145285.6-201ENST00000604632 637 ntBASIC19.2■□□□□ 0.66
ERCC2P18074 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 KRT18P22-201ENST00000402024 1347 ntBASIC19.2■□□□□ 0.66
ERCC2P18074 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
ERCC2P18074 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC2P18074 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC2P18074 AC005082.1-201ENST00000413042 2259 ntBASIC19.2■□□□□ 0.66
ERCC2P18074 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ERCC2P18074 AC112777.1-201ENST00000540175 1423 ntBASIC19.19■□□□□ 0.66
ERCC2P18074 AC034236.2-201ENST00000606662 1610 ntBASIC19.19■□□□□ 0.66
ERCC2P18074 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 AC133561.5-201ENST00000635547 218 ntBASIC19.19■□□□□ 0.66
ERCC2P18074 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC2P18074 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERCC2P18074 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ERCC2P18074 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERCC2P18074 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC2P18074 AC104581.1-202ENST00000635932 2618 ntBASIC19.19■□□□□ 0.66
ERCC2P18074 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC2P18074 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ERCC2P18074 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ERCC2P18074 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 HMGA1P5-201ENST00000412453 271 ntBASIC19.18■□□□□ 0.66
ERCC2P18074 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.18■□□□□ 0.66
ERCC2P18074 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.18■□□□□ 0.66
ERCC2P18074 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.18■□□□□ 0.66
ERCC2P18074 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.18■□□□□ 0.66
ERCC2P18074 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.18■□□□□ 0.66
ERCC2P18074 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.18■□□□□ 0.66
ERCC2P18074 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
ERCC2P18074 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ERCC2P18074 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
ERCC2P18074 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
ERCC2P18074 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ERCC2P18074 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.18■□□□□ 0.66
ERCC2P18074 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC2P18074 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms