Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PTPN1P18031 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.78■□□□□ 0.76
PTPN1P18031 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.78■□□□□ 0.76
PTPN1P18031 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN1P18031 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PTPN1P18031 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.78■□□□□ 0.76
PTPN1P18031 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.78■□□□□ 0.76
PTPN1P18031 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN1P18031 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PTPN1P18031 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN1P18031 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PTPN1P18031 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PTPN1P18031 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 STARP1-201ENST00000397973 869 ntBASIC19.77■□□□□ 0.76
PTPN1P18031 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN1P18031 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPN1P18031 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN1P18031 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PTPN1P18031 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN1P18031 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN1P18031 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN1P18031 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN1P18031 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
PTPN1P18031 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PTPN1P18031 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN1P18031 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PTPN1P18031 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
PTPN1P18031 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN1P18031 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.76■□□□□ 0.75
PTPN1P18031 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PTPN1P18031 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPN1P18031 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPN1P18031 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 MYC-208ENST00000641036 567 ntBASIC19.76■□□□□ 0.75
PTPN1P18031 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTPN1P18031 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN1P18031 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN1P18031 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.75■□□□□ 0.75
PTPN1P18031 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN1P18031 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 AC104390.1-201ENST00000555663 520 ntBASIC19.75■□□□□ 0.75
PTPN1P18031 AC087388.1-201ENST00000571370 1112 ntBASIC19.75■□□□□ 0.75
PTPN1P18031 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN1P18031 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN1P18031 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN1P18031 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN1P18031 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms