Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.5■□□□□ 0.39
TPRP12270 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TPRP12270 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPRP12270 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.5■□□□□ 0.39
TPRP12270 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.5■□□□□ 0.39
TPRP12270 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.5■□□□□ 0.39
TPRP12270 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.5■□□□□ 0.39
TPRP12270 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TPRP12270 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.49■□□□□ 0.39
TPRP12270 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.49■□□□□ 0.39
TPRP12270 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.49■□□□□ 0.39
TPRP12270 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
TPRP12270 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TPRP12270 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TPRP12270 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPRP12270 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 MRPL20P1-201ENST00000400819 433 ntBASIC17.48■□□□□ 0.39
TPRP12270 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPRP12270 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.48■□□□□ 0.39
TPRP12270 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TPRP12270 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.48■□□□□ 0.39
TPRP12270 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.48■□□□□ 0.39
TPRP12270 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPRP12270 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 OR8S1-201ENST00000310194 1080 ntBASIC17.47■□□□□ 0.39
TPRP12270 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TPRP12270 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.47■□□□□ 0.39
TPRP12270 C20orf181-201ENST00000623918 480 ntBASIC17.47■□□□□ 0.39
TPRP12270 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
TPRP12270 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.47■□□□□ 0.39
TPRP12270 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.47■□□□□ 0.39
TPRP12270 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.47■□□□□ 0.39
TPRP12270 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.47■□□□□ 0.39
TPRP12270 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.47■□□□□ 0.39
TPRP12270 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.47■□□□□ 0.39
TPRP12270 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.47■□□□□ 0.39
TPRP12270 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPRP12270 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.47■□□□□ 0.39
TPRP12270 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.47■□□□□ 0.39
TPRP12270 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.46■□□□□ 0.39
TPRP12270 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.46■□□□□ 0.39
TPRP12270 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
TPRP12270 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
TPRP12270 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.46■□□□□ 0.39
TPRP12270 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.46■□□□□ 0.39
TPRP12270 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.46■□□□□ 0.39
TPRP12270 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.46■□□□□ 0.39
TPRP12270 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.46■□□□□ 0.39
TPRP12270 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TPRP12270 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TPRP12270 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPRP12270 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms